Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-197 in CA Bladder Dyrskjot Cluster 47 Table contains all genes in the CA Bladder Dyrskjot cluster number 47. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-197 526 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854] zzz999 84159 ARID5B AT rich interactive domain 5B (MRF1-like) [Source:HGNC Symbol;Acc:17362] zzz999 64747 MFSD1 major facilitator superfamily domain containing 1 [Source:HGNC Symbol;Acc:25874] zzz999 80895 ILKAP integrin-linked kinase-associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:15566] zzz999 23335 WDR7 WD repeat domain 7 [Source:HGNC Symbol;Acc:13490] T 6793 STK10 serine/threonine kinase 10 [Source:HGNC Symbol;Acc:11388] zzz999 80212 CCDC92 coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:29563] zzz999 23140 ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 [Source:HGNC Symbol;Acc:29027] T 2634 GBP2 guanylate binding protein 2, interferon-inducible [Source:HGNC Symbol;Acc:4183] zzz999 79921 TCEAL4 transcription elongation factor A (SII)-like 4 [Source:HGNC Symbol;Acc:26121] zzz999 9459 ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:685] zzz999 599 BCL2L2 BCL2-like 2 [Source:HGNC Symbol;Acc:995] T 3716 JAK1 Janus kinase 1 [Source:HGNC Symbol;Acc:6190] zzz999 387680 FAM21A family with sequence similarity 21, member A [Source:HGNC Symbol;Acc:23416] zzz999 64780 MICAL1 microtubule associated monoxygenase, calponin and LIM domain containing 1 [Source:HGNC Symbol;Acc:20619] zzz999 5734 PTGER4 prostaglandin E receptor 4 (subtype EP4) [Source:HGNC Symbol;Acc:9596] T 84859 LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:HGNC Symbol;Acc:28637] zzz999 57020 C16orf62 chromosome 16 open reading frame 62 [Source:HGNC Symbol;Acc:24641] zzz999 91782 CHMP7 CHMP family, member 7 [Source:HGNC Symbol;Acc:28439] zzz999 5567 PRKACB protein kinase, cAMP-dependent, catalytic, beta [Source:HGNC Symbol;Acc:9381] T 25 ABL1 c-abl oncogene 1, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:76] zzz999 9709 HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:HGNC Symbol;Acc:13744] T 1727 CYB5R3 cytochrome b5 reductase 3 [Source:HGNC Symbol;Acc:2873] T 8459 TPST2 tyrosylprotein sulfotransferase 2 [Source:HGNC Symbol;Acc:12021] zzz999 54462 FAM190B family with sequence similarity 190, member B [Source:HGNC Symbol;Acc:29197] zzz999 80219 COQ10B coenzyme Q10 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:25819] zzz999 23077 MYCBP2 MYC binding protein 2 [Source:HGNC Symbol;Acc:23386] zzz999 5906 RAP1A RAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9855] zzz999 29066 ZC3H7A zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:30959] T 80232 WDR26 WD repeat domain 26 [Source:HGNC Symbol;Acc:21208] T 7095 SEC62 SEC62 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11846] T 4149 MAX MYC associated factor X [Source:HGNC Symbol;Acc:6913] zzz999 837 CASP4 caspase 4, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1505] zzz999 23064 SETX senataxin [Source:HGNC Symbol;Acc:445] T 1112 FOXN3 forkhead box N3 [Source:HGNC Symbol;Acc:1928] T 10972 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998] T 54386 TERF2IP telomeric repeat binding factor 2, interacting protein [Source:HGNC Symbol;Acc:19246] zzz999 5147 PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta [Source:HGNC Symbol;Acc:8788] zzz999 9535 GMFG glia maturation factor, gamma [Source:HGNC Symbol;Acc:4374] zzz999 3987 LIMS1 LIM and senescent cell antigen-like domains 1 [Source:HGNC Symbol;Acc:6616] zzz999 56940 DUSP22 dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:16077] zzz999 3588 IL10RB interleukin 10 receptor, beta [Source:HGNC Symbol;Acc:5965] T 9931 HELZ helicase with zinc finger [Source:HGNC Symbol;Acc:16878] T 22882 ZHX2 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:18513] zzz999 4659 PPP1R12A protein phosphatase 1, regulatory (inhibitor) subunit 12A [Source:HGNC Symbol;Acc:7618] zzz999 22876 INPP5F inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:17054] zzz999 55847 CISD1 CDGSH iron sulfur domain 1 [Source:HGNC Symbol;Acc:30880] zzz999 253725 FAM21C family with sequence similarity 21, member C [Source:HGNC Symbol;Acc:23414] zzz999 3384 ICAM2 intercellular adhesion molecule 2 [Source:HGNC Symbol;Acc:5345] zzz999 50650 ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 [Source:HGNC Symbol;Acc:683] T 8233 ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:HGNC Symbol;Acc:23019] zzz999 23760 PITPNB phosphatidylinositol transfer protein, beta [Source:HGNC Symbol;Acc:9002] P T 51569 UFM1 ubiquitin-fold modifier 1 [Source:HGNC Symbol;Acc:20597] T 81894 SLC25A28 solute carrier family 25, member 28 [Source:HGNC Symbol;Acc:23472] zzz999 6451 SH3BGRL SH3 domain binding glutamic acid-rich protein like [Source:HGNC Symbol;Acc:10823] zzz999 22877 MLXIP MLX interacting protein [Source:HGNC Symbol;Acc:17055] zzz999 11275 KLHL2 kelch-like 2, Mayven (Drosophila) [Source:HGNC Symbol;Acc:6353] zzz999 5525 PPP2R5A protein phosphatase 2, regulatory subunit B', alpha [Source:HGNC Symbol;Acc:9309] T 397 ARHGDIB Rho GDP dissociation inhibitor (GDI) beta [Source:HGNC Symbol;Acc:679] zzz999 64784 CRTC3 CREB regulated transcription coactivator 3 [Source:HGNC Symbol;Acc:26148] T 5777 PTPN6 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658] zzz999 832 CAPZB capping protein (actin filament) muscle Z-line, beta [Source:HGNC Symbol;Acc:1491] zzz999 11252 PACSIN2 protein kinase C and casein kinase substrate in neurons 2 [Source:HGNC Symbol;Acc:8571] zzz999 7188 TRAF5 TNF receptor-associated factor 5 [Source:HGNC Symbol;Acc:12035] T 54838 C10orf26 chromosome 10 open reading frame 26 [Source:HGNC Symbol;Acc:23510] zzz999 694 BTG1 B-cell translocation gene 1, anti-proliferative [Source:HGNC Symbol;Acc:1130] zzz999 7187 TRAF3 TNF receptor-associated factor 3 [Source:HGNC Symbol;Acc:12033] zzz999 23167 EFR3A EFR3 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:28970] T 25816 TNFAIP8 tumor necrosis factor, alpha-induced protein 8 [Source:HGNC Symbol;Acc:17260] T 9516 LITAF lipopolysaccharide-induced TNF factor [Source:HGNC Symbol;Acc:16841] zzz999 6310 ATXN1 ataxin 1 [Source:HGNC Symbol;Acc:10548] T 10611 PDLIM5 PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:17468] T 79770 TXNDC15 thioredoxin domain containing 15 [Source:HGNC Symbol;Acc:20652] T 3685 ITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) [Source:HGNC Symbol;Acc:6150] T 90 ACVR1 activin A receptor, type I [Source:HGNC Symbol;Acc:171] P T 11214 AKAP13 A kinase (PRKA) anchor protein 13 [Source:HGNC Symbol;Acc:371] T 8848 TSC22D1 TSC22 domain family, member 1 [Source:HGNC Symbol;Acc:16826] zzz999 29082 zzz999 Charged multivesicular body protein 4a [Source:UniProtKB/Swiss-Prot;Acc:Q9BY43] zzz999 22921 MSRB2 methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:17061] zzz999 3091 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:HGNC Symbol;Acc:4910] zzz999 4034 LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:HGNC Symbol;Acc:6691] T 5128 CDK17 cyclin-dependent kinase 17 [Source:HGNC Symbol;Acc:8750] T

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